Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015875471.1_cds_XP_016435820.1_31740
CDS Infomation

[gene=LOC107762024] [db_xref=GeneID:107762024] [protein=probable protein phosphatase 2C 6] [protein_id=XP_016435820.1] [location=join(23010..23297,23979..24356,29578..29695,29800..30023,30183..30737)] [gbkey=CDS]
Sequence

ATGGGGATTTGCTATTCCTCAAGTAAAAGCAAGAGCAGTGATGGGTTATGGGACAATAAG
AGTGAAAGCGGAAAGACTGATTCCAAGTTGAGAAAGAGCAGCTACAGTGGCGATTTCGGC
ACATTTTTAAGCAAGTTAAGTGGCGGGGTTGGTGGAGGAGGAGGTGCAGACCGGGCGCTG
CATCATATTCCTGGACGGCTTTTAGCAAATGGCGCAACCTCAGTTGCTTGCTTGCATACT
CAGCAAGGAAAGAAAGGAACCAATCAGGATGCCATGATCGTTTGGGAGAATTTTTGTTCG
CGAAGTGCTACAACCTTTTGTGGAGTATTTGATGGACATGGTCCGTATGGCCATATGGTG
GCAAGGAAAGTTCGAGATACCCTTCCACTTCTGCTGCATTCAGAGTGGGAAGTTAAGTCC
ATTGGAGATCAACGTAATGCTTCTGAGAATGGAAATGCTAATGGAGGTTCACATCTTGAT
GACGTCTTGGATGATGATTTGATTGAAGCTGTGGAAGCTGAGAGCAACGAAAAGTTCCCA
GAAATACATCTTCCCCTTAAGAGGTCACTATTAAAAGCTTTCAGATCAATGGATAAGGAA
CTCAAGTTGCATCCGTCAATTGATTGTTTCTGTAGTGGGTCAACTGCTGTTTCCTTGGTA
ATACAGGGCCAGGACATAATAGTTGGTAATGTTGGTGACTCAAGAGCAGTATTGGCAACT
AGAGATAAAGACAACTATTTAATGGCCGTACAGTTGACAGTAGATTTGAAGCCTAATCTT
CCAAGAGAAGCTGCTAGGATACAGAAATGCAAAGGCAGAGTTTTCGCATTGCAAGATGAG
CCAGAGGTTGCACGTGTATGGTTGCCAAACAGTGACTCTCCTGGTTTGGCAATGGCCAGA
GCATTTGGTGATTTTTGTCTCAAGGATTTTGGTTTAATCTCTGTCCCTGATGTGTATTAC
CACCGCATCACTGATAGGGATGAGTTTGTTGTTCTAGCAACCGATGGGGTATGGGATGTC
CTTTCTAATAAGGAAGCTGTGGATATTGTTGCCTCAGCCCCAAGTCGCGCTACAGCTGCC
CGAGCTCTTGTTGACTGCGCGACAAGAGCTTGGAGGCTGAAGTACCCCACATCAAAGAGT
GATGACTGTGCTGTAGTATGCCTTTTCCTGGATGGTGTATCTGCACCTGATGTCATAGTG
ACAGAGACGCAATATGATTTGACAAAACCTCCTGACGTGCAAATGGAGACAATTGTTACA
GATGGCAACGCTGAAAGTGCAGATATTATTGATACTGTTTCAGCTTCTCATATTGCTGTT
CTTGAACATTCAGGTACTACAAAAGATTCCAGTGAGATAGTTCCTGTTGACGAGTCAGTG
GAAGAACAGCTTGGTGATAAGGGTCTTGGCCAGTCTAAGAGAAGCCTAGCTGAGTGCCTT
TCAACTGCACAAGATGAGGAATGGTCGGCCCTTGAGGGAGTTACAAGGGTTAATAGCCTT
CTTAGTCTTCCTAGATTCTTGTCTGGTGACAAAAGGTCAGCCAGTTGGAGAAAATGGTTG
TAA

Peptide Sequence

PEP ID

XP_016435820.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 6 [Nicotiana tabacum]
Sequence

MGICYSSSKSKSSDGLWDNKSESGKTDSKLRKSSYSGDFGTFLSKLSGGVGGGGGADRAL
HHIPGRLLANGATSVACLHTQQGKKGTNQDAMIVWENFCSRSATTFCGVFDGHGPYGHMV
ARKVRDTLPLLLHSEWEVKSIGDQRNASENGNANGGSHLDDVLDDDLIEAVEAESNEKFP
EIHLPLKRSLLKAFRSMDKELKLHPSIDCFCSGSTAVSLVIQGQDIIVGNVGDSRAVLAT
RDKDNYLMAVQLTVDLKPNLPREAARIQKCKGRVFALQDEPEVARVWLPNSDSPGLAMAR
AFGDFCLKDFGLISVPDVYYHRITDRDEFVVLATDGVWDVLSNKEAVDIVASAPSRATAA
RALVDCATRAWRLKYPTSKSDDCAVVCLFLDGVSAPDVIVTETQYDLTKPPDVQMETIVT
DGNAESADIIDTVSASHIAVLEHSGTTKDSSEIVPVDESVEEQLGDKGLGQSKRSLAECL
STAQDEEWSALEGVTRVNSLLSLPRFLSGDKRSASWRKWL

Transcript Sequence

Gene sequence data has not been registered.